Data Mining (HSE)
Тема | Название | Описание |
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Much Further Reading | Every section below contains a few papers (or even Wikipedia pages) that easy to read, without much math. Some students asked more advanced questions (e.g. relation between Bayesian modeling and logistic regression), so here is a list of some more advanced books. |
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Exam | Data for the third part | |
Visualizations (and Getting to Know Orange) | Exercise (visualizations) | |
Mushrooms | ||
Exercise (insignificance of significance) | ||
Orange and basic visualizations | ||
Mosaic and Sieve diagram | (If the video doesn't play: it happens to me, too. There seem to be something wrong on YT's side. I hope it resolves, otherwise I'll reupload.) |
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Task solutions | ||
Arguments against testing of null hypotheses | ||
Of Carrots, Horses and the Fear of Heights | A blog post about how statistical tests work and why we have to be very careful when using them in data mining. |
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How to Abuse p-values in Correlations | A shorter and drier version of the same. |
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Cohen (1994): The Earth is Round (p < 0.05) | A famous, juicy paper with general arguments against null-hypothesis testing. |
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Introduction to predictive modelling | Surviving on mushrooms | |
Recognizing types of animals | ||
Animals | ||
Exploring Human Development Index | ||
Human development index (+ religions + continents) | ||
Classification trees | ||
Decision tree learning (Wikipedia) [mandatory read, but see remark] | The page contains the crux of the lecture. Its title and the fact that the first link on the page points to a completely unrelated kind of decision trees demonstrate why classification tree is a better term than decision tree. [Mandatory reading, with grain of salt; you most certainly don't need to know that "It is also possible for a tree to be sampled using MCMC." :) ] |
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Information Gain in Decision Trees (Wikipedia) [optional reading] | We have spent a lot of time explaining the concept of entropy. Wikipedia page is rather mathematical and dry, but may be a good antidote to less formal and less organized exposition at the lecture. :) |
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Induction of Decision Trees (Quinlan, 1986) [optional reading] | Quinlan is the author of one of the first and most influential algorithm for induction of classification trees. The article is more of historical interest, but it shows the thinking of the pioneers of AI. After some philosophy in the first two sections, it explains the reasoning behind the tree-induction algorithms. |
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Model Performance | Scores for evaluation of models | |
mushroom-predictions | ||
Sara's Hamsters | ||
Sara's Hamsters - solution | ||
Cross validation | ||
Scores for evaluation of model performance | ||
List of performance scores (Wikipedia) | Lists all kinds of scores, useful as reference |
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Cross validation (Wikipedia) [optional] | Use this page as a list of different sampling techniques. |
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An introduction to ROC analysis (Fawcett, 2006) [mandatory: first seven sections] | A very accessible paper about ROC curves. |
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A Unified View of Performance Metrics: Translating Threshold Choice into Expected Classification Loss [just the Introduction; optional] | ||
Linear models for classification | Recognizing mushrooms - again | |
Mushrooms (numeric) | ||
Decision boundaries | ||
Linear models for classification | ||
Logistic regression (Shalizi, 2012) [mandatory, see below which parts] | A more mathematical (compared to our lecture), but still friendly explanation of logistic regression. Read the first 6 pages, that is, section 12.1 and the (complete) section 12.2. You don't have to know the formulas, but you need to understand their meaning. (This is Chapter 12 from Advanced Data Analysis from an Elementary Point of View. Download the draft from the author's site while it's free.) |
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Nomograms for Visualization of Naive Bayesian Classifier (Možina, 2004) [mandatory, you may skip Section 2] | A quick derivation of the Naive Bayesian classifier, and derivation and explanation of nomograms. |
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Nomograms for Linear Models | ||
Other types of classifiers | Exploration of Kernel Methods | |
Other models | ||
A nice explanation of the kernel trick | ||
Kernel Methods for Pattern Analysis (Shawe-Taylor, Christiannini, 2004) [optional, beyond this course] | The best-known book about kernel methods like SVM. Warning: lots of mathematics. Not a required reading for this class. |
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Random Forests (Breiman, 2001) [optional] | Contrary from SVM, random forests are so easy to explain and understand that they don't require additional literature. But if anybody is interested, here's the definitive paper about them. |
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The Random Subspace Method for Constructing Decision Forests (Ho, 1998) [optional] | ... and this is the paper from the less-known inventor of the method. It was Breiman (above paper) though, who thoroughly examined the method and gave it a name. Neither this paper nor the above is a required reading, though. |
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Regularization | Regularization Experiment | |
Regularization | ||
Elements of Statistical Learning [optional, way beyond this course] | We are just telling you about this book because we must do it at some point. It is too difficult for this course, but it provides an overview of machine learning methods from statistical point of view. Chapters 4 and 5 should not be too difficult, and you can read them to better understand linear models and regularization. You can download the book for free. |
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Clustering | Clustering versus Classification | |
Exploration of linkage functions | ||
Data sets for clustering | ||
Exploration of Dendrograms | ||
Exploration of Clusters | ||
Clustering (part 1: k-means and hierarchical clustering) | ||
Clustering (part 2: linkages, distances) | ||
Introduction to Data Mining, Chapter 8: Cluster Analysis: Basic Concepts and Algorithms (Tan P-N, Kumar, 2006) | Obligatory reading: sections 8.2 (you may skip 8.2.6), 8.3 (skip 8.3.3), The Silhouette Coefficient (pg. 541). Everything else is also quite easy to read, so we recommend it. |
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Text mining | Fake news | |
Text Mining | ||
Text Mining - In-class assignment | ||
Allahyari et al. - A Brief Survey of Text Mining | Comprehensive overview of text mining techniques and algorithms. [obligatory] |
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Bird and Klein: Regular Expressions for Natural Language Processing | Why regular expression can be very helpful. [optional read] |
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Ramos: Using TF-IDF to Determine Word Relevance in Document Queries | Why using TF-IDF is a good idea. [technical, interesting read] |
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An opinion word lexicon and a training dataset for Russian sentiment analysis of social media | ||
Text Mining course notes | Notes from the text mining lecture. |
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Liu, Bing: Sentiment Analysis and Opinion Mining | A book on sentiment analysis and opinion mining. Freely available in the link. |
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Projections and embeddings | Projections | |
Deep learning and images | ||
Distances | ||
Analysis of Multivariate Social Science Data, Chapter 3: Multidimensional Scaling (Bartholomew, 2008) [recommended] | The chapter is particularly interesting because of some nice examples at the end. |
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FreeViz—An intelligent multivariate visualization approach to explorative analysis of biomedical data (Demšar, 2007) [optional] | See the example in the introduction. You can also read the Methods section, if you're curious. |
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Embeddings ... and a practical case | animals and fruits | |
Assignments | Assignment: ROC Curve | |
Assignment: Regression | ||
Assignment: Classifiers and their Decision Boundaries | ||
Solution: Classification boundaries | ||
Solution: ROC curve | ||
Solution: Regression |